Concept Architecture
Multiple Regression in Trial-Based Economic Evaluation
Each coefficient in a multiple regression is a partial effect, read with the other explanatory variables held fixed, which lets a trial's cost or QALY difference be separated from differences in the patients randomised. In health economics it is used to adjust differences in mean costs and mean QALYs between trial arms for baseline covariates, to model skewed cost data and to estimate incremental net benefit from patient-level data. The adjustment matters because a chance imbalance in baseline health can move an incremental cost-effectiveness ratio a long way. The method is often called multivariable regression, while multivariate regression strictly means something else.
One outcome and several predictors
The regression analysis family covers any model of how an outcome varies with explanatory variables, and multiple regression is the case with two or more of them. With a continuous outcome and an identity link it is multiple linear regression, estimated by ordinary least squares as described on that page.
where is the outcome for patient (a cost, a QALY total or a net benefit), to are the explanatory variables, is the intercept, is the coefficient on and is the error term.
With several predictors each is a partial coefficient, the expected change in the outcome for a one-unit change in among patients who share the same values of the other variables. Hidalgo and Goodman describe the multivariable model as one that can assess independent relationships while adjusting for potential confounders.
Multivariable, multivariate and why the name matters
Hidalgo and Goodman separate two terms that are often swapped. Multivariate analysis has two or more outcome variables; multivariable analysis has one outcome and several predictors. Of 30 articles in a year of the American Journal of Public Health that reported a "multivariate" method, 25 (83%) were in fact multivariable and 5 (17%) were multivariate. They recommend naming models by the number of predictors (simple or multivariable) and by the type of outcome.
A regression of cost on treatment and age is multivariable. A joint model of cost and QALYs, such as seemingly unrelated regression, has two outcomes and is multivariate, as is a multivariate meta-analysis.
Adjusting trial costs and QALYs for baseline covariates
Randomisation balances covariates on average, not in any single trial. The European Medicines Agency guideline on adjustment for baseline covariates (EMA/CHMP/295050/2013) states that adjusting for a covariate strongly or moderately associated with the outcome generally improves efficiency and avoids conditional bias from chance imbalance. It asks for covariates to be pre-specified and few, says the baseline value of a continuous outcome should usually be included, and keeps out of the primary analysis covariates measured after randomisation or chosen for an imbalance seen after the event.
Manca, Hawkins and Sculpher make the matching case for the QALY endpoint of a trial-based cost-effectiveness analysis. Mean baseline utility is invariably imbalanced between arms, and a patient's baseline health state utility value is likely to be highly correlated with QALYs over follow-up, not least because it usually enters the QALY calculation. In their analysis the widely used methods of calculating the QALY difference gave incorrect results whenever baseline utility was imbalanced, whether or not the difference was statistically significant, while multiple regression with baseline utility as a covariate gave appropriate estimates and a measure of their sampling variability.
In a randomised controlled trial the adjusted treatment coefficient keeps its causal reading, while the coefficients on the covariates are only associations conditional on the model. In an observational study the regression deals with confounding only for confounders that were measured and correctly specified, which is why propensity score and instrumental variable methods are often run alongside it.
Worked example with eight patients and an imbalance in baseline utility
All numbers in this example are illustrative. Four patients per arm have a baseline utility, a one-year QALY total and a cost in GBP, and by chance the treated arm starts healthier.
| Arm | Baseline utility | QALYs | Cost (GBP) |
|---|---|---|---|
| Treatment | 0.60, 0.70, 0.80, 0.90 (mean 0.75) | 0.57, 0.63, 0.71, 0.81 (mean 0.68) | 2,100, 1,900, 1,900, 2,100 (mean 2,000) |
| Control | 0.50, 0.60, 0.70, 0.80 (mean 0.65) | 0.44, 0.54, 0.62, 0.68 (mean 0.57) | 1,500, 1,300, 1,300, 1,500 (mean 1,400) |
1. Compare raw means. Mean QALYs differ by 0.11 and mean costs by GBP 600, so the unadjusted ICER is 600 divided by 0.11, or about GBP 5,455 per QALY gained. Mean baseline utility differs by 0.10.
2. Fit QALYs on treatment and baseline utility. With a treatment indicator and baseline utility as predictors, the least squares coefficient on baseline utility equals the pooled within-arm slope.
where is the sum of squared deviations of baseline utility from its mean in arm , is the sum of their cross-products with the QALY deviations, and are arm means, and arm 1 is treatment. Baseline deviations are -0.15, -0.05, 0.05 and 0.15 in each arm, so each is 0.05. QALY deviations are -0.11, -0.05, 0.03 and 0.13 with treatment and -0.13, -0.03, 0.05 and 0.11 with control, so each is 0.04.
where is QALYs per unit of baseline utility and is the adjusted difference in mean QALYs. The fitted model is QALYs = 0.05 + 0.03 treatment + 0.8 baseline utility. Baseline utility alone would give a slope of 0.85, because without the treatment indicator part of the arm gap is credited to baseline health.
3. Fit cost on the same predictors. Costs are uncorrelated with baseline utility within each arm here, so the adjusted cost difference stays at GBP 600 and the adjusted ICER is 600 divided by 0.03, or GBP 20,000 per QALY gained.
4. Run a net-benefit regression. At an illustrative GBP 25,000 per QALY, each patient's net benefit is 25,000 times QALYs minus cost. On treatment alone the coefficient is 25,000 times 0.11 minus 600, or GBP 2,150; with baseline utility added it is 25,000 times 0.03 minus 600, or GBP 150. A treatment by baseline utility interaction term is estimated at zero in these data.
5. Interpret. About 0.08 of the apparent 0.11 QALY gain reflects the treated arm's better starting health, so the unadjusted ICER is about a quarter of the adjusted one and the adjusted net benefit is only just positive. A real analysis adds standard errors or bootstrapping intervals.
Cost regressions for skewed data
Patient-level costs are often right-skewed. Mihaylova and colleagues note that least squares on raw costs is unbiased in randomised data but sensitive to extreme values, while a regression on log costs needs back transformation to say anything about mean cost. Barber and Thompson illustrate generalised linear models for trial costs, with an identity link for additive covariate effects or a log link for multiplicative ones; in both of their examples the gaussian model fitted poorly, and with prognostic covariates the choice of distribution could materially change the estimates.
where is the expected cost of patient given the covariates, is the treatment indicator, to are baseline covariates and the terms are log-scale coefficients, fitted for example with a gamma distribution. The exponent of is a ratio of mean costs, so an incremental cost in GBP comes from averaging predicted costs with set to one and to zero.
Manning and Mullahy found that no single log-model estimator was best under all the conditions they simulated and that a less suitable one can lose much precision, so the skewness and tail shape of the data guide the choice.
Costs and effects together
The ICER is a ratio and does not sit naturally as the dependent variable of a regression. Hoch, Briggs and Willan proposed net-benefit regression instead, in which each patient's net benefit is regressed on a treatment indicator and covariates.
where is the willingness to pay per unit of effect, and are the patient's effect and cost, and is the covariate-adjusted incremental net benefit. Its stated advantages include adjustment for imperfect randomisation and identification of important subgroups. Hoch and colleagues later showed that a positive treatment coefficient means the new treatment is cost-effective at , with an ICER below when it adds QALYs, and that one minus its one-sided p-value, traced across values of , gives a cost-effectiveness acceptability curve.
Willan, Briggs and Hoch then proposed seemingly unrelated regression, with cost and effect equations fitted jointly. The equations need not share covariates, and the joint fit can be more efficient than two unrelated least squares regressions.
Interaction terms, collinearity and overfitting
Three modelling choices can decide whether the model helps or misleads. An interaction effect term, the product of treatment and a covariate, lets the treatment effect vary with that covariate and is the regression form of a subgroup analysis. The EMA guideline keeps such interactions out of the primary model, so they are best pre-specified and reported as exploration of treatment effect heterogeneity.
When predictors such as age and comorbidity count overlap, multicollinearity inflates the standard errors of their separate coefficients, as collinearity diagnostics show; randomised treatment is unrelated to the covariates in expectation, so its own coefficient is little affected.
Many covariates in a small sample risk overfitting. In simulations by Austin and Steyerberg, linear regression needed about two subjects per variable for coefficients with relative bias below 10% and accurate standard errors, but many more for an unbiased R-squared.
Multiple regression compared with nearby methods
Neighbouring methods share the regression form but differ in outcome and use. The table compares them.
| Method | Outcome | Typical health economics use |
|---|---|---|
| Multiple linear regression | One continuous outcome, two or more predictors | Adjusted cost, QALY or net benefit difference |
| Logistic regression | One binary outcome | Event probability for a model |
| Seemingly unrelated regression | Two or more outcomes, jointly | Cost and effect equations together |
| Meta-regression | Study-level effect estimates | Explaining heterogeneity across trials |
Limitations and common misreadings
Most errors come from reading more into the coefficients than the model can deliver. Five recur.
- Calling the model multivariate. With one outcome the correct term is multivariable or multiple regression.
- Choosing covariates after seeing the data. Covariates picked for an observed imbalance belong in the analysis plan instead.
- Leaving out baseline utility. An unadjusted QALY difference can misstate the ICER even when the imbalance is not significant.
- Reading every coefficient causally. Only the randomised treatment coefficient has a causal reading in a trial.
- Assuming adjustment removes all confounding. Outside randomised data, unmeasured confounders remain.
Sources
- Hidalgo B, Goodman M. Multivariate or multivariable regression? American Journal of Public Health. 2013;103(1):39-40. https://doi.org/10.2105/AJPH.2012.300897
- European Medicines Agency, Committee for Medicinal Products for Human Use. Guideline on adjustment for baseline covariates in clinical trials. EMA/CHMP/295050/2013. 26 February 2015. https://www.ema.europa.eu/en/documents/scientific-guideline/guideline-adjustment-baseline-covariates-clinical-trials_en.pdf
- Manca A, Hawkins N, Sculpher MJ. Estimating mean QALYs in trial-based cost-effectiveness analysis: the importance of controlling for baseline utility. Health Economics. 2005;14(5):487-496. https://doi.org/10.1002/hec.944
- Barber J, Thompson S. Multiple regression of cost data: use of generalised linear models. Journal of Health Services Research and Policy. 2004;9(4):197-204. https://doi.org/10.1258/1355819042250249
- Manning WG, Mullahy J. Estimating log models: to transform or not to transform? Journal of Health Economics. 2001;20(4):461-494. https://doi.org/10.1016/s0167-6296(01)00086-8
- Mihaylova B, Briggs A, O'Hagan A, Thompson SG. Review of statistical methods for analysing healthcare resources and costs. Health Economics. 2011;20(8):897-916. https://doi.org/10.1002/hec.1653
- Hoch JS, Briggs AH, Willan AR. Something old, something new, something borrowed, something blue: a framework for the marriage of health econometrics and cost-effectiveness analysis. Health Economics. 2002;11(5):415-430. https://doi.org/10.1002/hec.678
- Hoch JS, Rockx MA, Krahn AD. Using the net benefit regression framework to construct cost-effectiveness acceptability curves. BMC Health Services Research. 2006;6:68. https://doi.org/10.1186/1472-6963-6-68
- Willan AR, Briggs AH, Hoch JS. Regression methods for covariate adjustment and subgroup analysis for non-censored cost-effectiveness data. Health Economics. 2004;13(5):461-475. https://doi.org/10.1002/hec.843
- Austin PC, Steyerberg EW. The number of subjects per variable required in linear regression analyses. Journal of Clinical Epidemiology. 2015;68(6):627-636. https://doi.org/10.1016/j.jclinepi.2014.12.014
Related Concepts (4)
Institutional Perspectives (3)
- EMA
Pre-Specified Baseline Covariates in the Primary Analysis
The EMA guideline on adjustment for baseline covariates states that adjusting for a covariate strongly or moderately associated with the primary outcome generally improves efficiency and avoids conditional bias from chance imbalance. Covariates must be pre-specified in the protocol, only a few should be included, and the baseline value of a continuous outcome should usually be one of them. Variables measured after randomisation, or chosen because of imbalance observed post hoc, should not enter the primary analysis.
EMA, Guideline on adjustment for baseline covariates in clinical trials (EMA/CHMP/295050/2013), adopted 26 February 2015, in effect from 1 September 2015, Executive summary and sections 5.4 to 5.6, 6.1 and 6.2View source → - FDA
Linear Regression Adjustment for the Average Treatment Effect
FDA accepts covariate adjustment through a linear model to estimate the average treatment effect in randomised trials. The outcome is regressed on an intercept, a treatment indicator and baseline covariates by ordinary least squares, and the treatment coefficient is the estimate. FDA states that this remains valid even when the model is misspecified, recommends adjusting for the covariates expected to be most strongly associated with the outcome, and asks sponsors to consider robust standard errors such as the Huber-White sandwich when the model has no treatment by covariate interactions.
FDA, Adjusting for Covariates in Randomized Clinical Trials for Drugs and Biological Products, Guidance for Industry, May 2023, sections III.A and III.BView source → - IQWiG
Reporting and Variable Selection in Multifactorial Regression Models
IQWiG's General Methods treat multifactorial methods mainly as a way to compensate for confounding in non-randomised studies, and set out what a report should usually give so that such a model can be judged. This includes an a priori specification of the outcome and all potential explanatory variables, how model assumptions and goodness of fit were checked, and estimates with standard errors and confidence intervals for every explanatory variable. Where variable selection cannot be avoided, IQWiG uses a form of backward elimination, which it prefers to forward selection.
IQWiG, General Methods, Version 8.0 of 19 December 2025 (English translation), section 10.3.6View source →
Library
Publications
5
Multivariate or multivariable regression? — Hidalgo B, Goodman M, Vol. 103, No. 1, pp. 39-40 ed., 2013 (American Journal of Public Health)
Journal article listed in the Sources of the HealthEconomics.wiki Concept Architecture article on Multiple Regression, where it is cited as a reference for that concept.
Journal ArticleView source →Use of a decision aid including information on overdetection to support informed choice about breast cancer screening: a randomised controlled trial — Hersch J, Barratt A, Jansen J, et al, Vol. 385, No. 9978, pp. 1642-1652 ed., 2015 (Lancet)
Journal article listed in the Sources of the HealthEconomics.wiki Concept Architecture article on Informed Choice, where it is cited as a reference for that concept.
Journal ArticleView source →Using the net benefit regression framework to construct cost-effectiveness acceptability curves — Hoch JS, Rockx MA, Krahn AD, Vol. 6, Article 68 ed., 2006 (BMC Health Services Research)
Journal article listed in the Sources of the HealthEconomics.wiki Concept Architecture article on Multiple Regression, where it is cited as a reference for that concept.
Journal ArticleView source →The number of subjects per variable required in linear regression analyses — Austin PC, Steyerberg EW, Vol. 68, No. 6, pp. 627-636 ed., 2015 (Journal of Clinical Epidemiology)
Journal article listed in the Sources of the HealthEconomics.wiki Concept Architecture article on Multiple Regression, where it is cited as a reference for that concept.
Journal ArticleView source →Evaluating the time toxicity of cancer treatment in the CCTG CO.17 trial — Gupta A, O'Callaghan CJ, Zhu L, et al, Vol. 19, No. 6, pp. e859-e866 ed., 2023 (JCO Oncology Practice)
Journal article listed in the Sources of the HealthEconomics.wiki Concept Architecture article on Patient Time Cost, where it is cited as a reference for that concept.
Journal ArticleView source →
Frequently Asked Questions (6)
What is multiple regression?
Multiple regression models one outcome, such as patient cost or QALYs, on two or more explanatory variables, adjusting each coefficient for the others.
Source: Hidalgo and Goodman 2013
Why is multiple regression used to adjust for baseline utility in a trial-based cost-effectiveness analysis?
Mean baseline utility is invariably imbalanced between trial arms, and a patient's baseline utility is likely to be highly correlated with QALYs over follow-up, partly because it usually enters the QALY calculation. Manca, Hawkins and Sculpher showed that the widely used ways of calculating the QALY difference gave incorrect results whenever baseline utility was imbalanced, whether or not the imbalance was statistically significant. Multiple regression with baseline utility as a covariate gave appropriate estimates of the QALY difference and a measure of its sampling variability. Without that adjustment the incremental cost-effectiveness ratio can be misleading.
Source: Manca, Hawkins & Sculpher 2005
What is the difference between multiple regression and multivariate regression?
Multiple regression, also called multivariable regression, has one outcome and two or more explanatory variables. Multivariate analysis, in the definition used by Hidalgo and Goodman, has two or more outcome variables. In one year of the American Journal of Public Health, 25 of the 30 articles that reported a multivariate method were in fact multivariable. A regression of patient cost on treatment and age is therefore multiple regression, while a joint model of cost and QALYs, such as seemingly unrelated regression, is multivariate. Hidalgo and Goodman recommend naming models by the number of predictors and by the type of outcome.
Source: Hidalgo and Goodman 2013
How does multiple regression handle skewed patient-level cost data?
Patient-level costs are often right-skewed, with a small number of very expensive patients pulling the mean upwards. Mihaylova and colleagues note that ordinary least squares regression on raw costs gives unbiased estimates in randomised data and reports results on the cost scale, but it is sensitive to extreme values. A regression on log-transformed costs reduces the skew, yet differences on the log scale do not directly give the difference in mean costs. Back transformation to the original scale is then required, and the approaches used are dominated by Duan's non-parametric smearing method.
Source: Mihaylova et al. 2011
How is multiple regression used to estimate incremental net benefit?
Hoch, Briggs and Willan noted that the incremental cost-effectiveness ratio does not lend itself to regression methods and proposed net-benefit regression instead. Each patient's net benefit is calculated as the willingness to pay per unit of effect times the patient's effect, minus the patient's cost, and this value is regressed on a treatment indicator and baseline covariates. The treatment coefficient is then the covariate-adjusted incremental net benefit at that willingness to pay. Its stated practical advantages include adjustment for imperfect randomisation and the identification of important subgroups.
Source: Hoch, Briggs & Willan 2002
Which covariates should be included in a multiple regression analysis of a randomised trial?
The European Medicines Agency guideline on adjustment for baseline covariates states that adjusting for a covariate strongly or moderately associated with the outcome generally improves efficiency and avoids conditional bias from chance imbalance. Covariates for the primary analysis must be pre-specified in the protocol and kept few, and the baseline value of a continuous outcome should usually be included. Variables measured after randomisation, and variables chosen because of an imbalance seen after the event, are kept out of the primary analysis. Treatment by covariate interactions are also left out of the primary model and are better reported as exploratory subgroup work.
Source: EMA 2015
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British health economist
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Verification date: 14 Oct 2026
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